Women from Riang, Jonglei state, carry items that MSF will distribute to local families, South Sudan

South Sudan

Two years after the signing of a peace agreement, and despite the formation of a unity government, the situation in South Sudan remains fragile.

South Sudan was hit by multiple emergencies in 2020, including escalating violence, COVID-19, severe flooding, and high levels of food insecurity. A total of 7.5 million people – around two-thirds of the population – were in need of humanitarian assistance. Doctors Without Borders (MSF) responded to the urgent medical and humanitarian needs, while ensuring essential healthcare services continued in the 16 projects we run in the country. 

Increased violence and fighting

There were repeated outbreaks of intense fighting, some lasting for months at a time, across South Sudan in 2020. Between January and October, more than 2,000 people were killed – including a South Sudanese member of our staff – and tens of thousands of people were displaced.

In Jonglei state and the Greater Pibor Administrative Area, our teams in Pieri, Lankien and Pibor provided emergency medical care to people arriving in mass influxes of casualties, many with serious gunshot and stab wounds. The most critical patients from Pieri and Lankien were evacuated by plane to our hospital in the Protection of Civilians (PoC) site in Bentiu for surgery. Our teams also improved water and sanitation for the thousands of people who took refuge in an area next to the United Nations Mission in South Sudan (UNMISS), in Pibor town.

In June, we suspended activities in Pibor after most of our staff sought safety in the remote bush area. When violence broke out again in August, we launched an emergency response. The project was closed in December, to enable the reorganisation of our medical activities in a more agile and efficient manner to respond to the community’s emergency health needs.

People collect water from MSF’s surface water treatment center in Pibor town, the Greater Pibor Administrative Area, South Sudan.
MSF in South Sudan in 2020

Floods in Pibor

People collect water from MSF’s surface water treatment center in Pibor town, the Greater Pibor Administrative Area, South Sudan. MSF has been providing 60 000 liters of drinking water per day to the people of Pibor town after all boreholes became contaminated by floodwaters.

COVID-19 response

As the COVID-19 pandemic spread globally in early 2020, concerns that an outbreak would exacerbate an already dire humanitarian situation led MSF to integrate COVID-19 measures and new activities into all existing projects across the country and start dedicated projects in Juba and Malakal teaching hospitals. In Juba, we focused on strengthening infection prevention and control measures in health facilities, including the teaching hospital, and in the national public health laboratory, the country’s primary testing facility. Our teams also trained healthcare workers, donated supplies, conducted health promotion activities, and set up handwashing points in several public locations.

Refugees and internally displaced people

In July, UNMISS announced it would begin to hand over the five PoC sites in the country to the national government. In Bentiu and Malakal PoCs, where we manage hospitals, the process had not yet started. However, in Bentiu, patients and community members voiced concerns to our staff about their safety once the UN is no longer protecting the site. In both PoCs, our teams continued to treat conditions caused mainly by the living conditions, including malaria, diarrhoeal disease, hepatitis E, cholera, typhoid fever, trachoma and skin infections, and call for improved water and sanitation. 

In Yei county, following new waves of displacement, MSF outreach and mobile teams distributed relief items and offered general medical consultations, immunisations and psychosocial help. We also supported the paediatric ward of Yei state hospital and ran general healthcare services at our clinic in Jansuk. At our clinic in Doro camp, and in the hospital in Bunj in Upper Nile state, we provided medical care to refugee and host communities, including vaccinations, treatment for malaria and 
malnutrition, care for survivors of sexual and gender-based violence, and assistance with births.

Mother and child care

We offered paediatric and maternal healthcare throughout the year at Aweil state hospital, which serves around 1.3 million people. In October, we supported the health ministry’s response to a seasonal peak in malaria, with rapid diagnostic tests, medication, and supervision at the hospital and in general healthcare centres.

An Doctors Without Borders (MSF) mobile clinic brings life-saving medical care to Lukurunyarg after the flooding made the roads impassable.
MSF in South Sudan in 2020

Heavy floods threaten the lives of thousands of people in Greater Pibor

A Doctors Without Borders (MSF) mobile clinic brings life-saving medical care to Lukurunyarg after the flooding made the roads impassable.

Abyei Special Administrative Area

In Abyei, a disputed area between Sudan and South Sudan, our 180-bed hospital in Agok town continued to provide surgery, neonatal and paediatric care, and treat people for snakebites and diseases such as HIV, tuberculosis, malaria, and diabetes.

Project closure

In July, we closed the projects we had been running for 14 years in Yambio county, Western Equatoria state. These projects focused on seasonal malaria chemoprevention for vulnerable children in rural areas, support for the regional hospital, and an intervention assisting demobilised child soldiers.

No. staff in 2020: 3,555 (FTE) » Expenditure in 2020: €77.8 million MSF first worked in the country: 1983

MSF, Doctors without Borders, South Sudan, Heptisis E Vaccination Campaign
Hepatitis E

South Sudan: The world's first vaccination campaign to control an outbreak of hepatitis E

Press Release 20 Jul 2022
MSF, South Sudan, Violence in Leer County
Armed conflict

Renewed violence in Leer leads to dozens killed, including MSF staff member

Press Release 21 Apr 2022
Displaced people in Agok, South Sudan
South Sudan

Humanitarian aid urgently needed for thousands of displaced people from Agok

Latest News 10 Mar 2022
South Sudan faces many challenges, including ongoing conflict, displacement, food shortages/malnutrition, lack of social services including health care, and insecurity. MSF hospitals have been under attack from different armed groups, putting the medical staff and patients at risk.
South Sudan

MSF staff member killed in intercommunal violence in Agok

Press Release 15 Feb 2022
MSF, Doctors Without Borders, thousands living in dire conditions due to flooding in South Sudan
Natural Disasters

South Sudan: hundreds of thousands still living in precarious conditions months after floods

Latest News 7 Jan 2022
Aerial view over flood affected Bentiu in Unity state, South Sudan
Natural Disasters

South Sudan: severe flooding leaves nearly 800,000 struggling

Press Release 24 Nov 2021